Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (293), Expect = 5e-31
 Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 4/162 (2%)

Query: 231 SIQDELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVV 290
           S+ D+LTG  NRR F+ ++ Q+   S  K  + ++DIDHFKQ ND++GH+ GD V+ YV 
Sbjct: 194 SLTDKLTGLNNRRAFESRLAQEFLPSTPKCSLLVIDIDHFKQFNDTWGHNAGDKVLVYVA 253

Query: 291 RHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAI-SVGFHVEQQPL---K 346
           ++L+     E LVARYGGEEF I  ++   E  +   + +RD I +    +++  L   K
Sbjct: 254 QNLKQAVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTLKKDNLDLGK 313

Query: 347 VSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQD 388
           VSVSIG     ++    +   +AD ALY+AK  GRNR+ L D
Sbjct: 314 VSVSIGVAKAYANETPEQFFERADGALYRAKGTGRNRVCLAD 355