Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (249), Expect = 7e-26
 Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 33/298 (11%)

Query: 95  VLRWYQKPIKSGLYLLMMAHSLLFALLLYLLFRLNPEDIGLRILIASLSLSSVYLISAIV 154
           +L W Q  + + L L      L+ +L + +L+R    ++ L  +   L L  ++L+  ++
Sbjct: 108 LLPWVQASVANRLLLFFPLLMLINSLTISVLWRYGGRELRLACM-PLLVLELLFLLQLLL 166

Query: 155 AAKNGQRGRPEQTLFAVVLAMMMVMLYVPFVAYQTLPLLAVFRASTIVVQNLFFFIILGT 214
                      +TL     + M  + Y     +QT   LA+F            F+ LGT
Sbjct: 167 -----------RTLILGTTSDMN-LTYAGSQFFQTSGTLAIF-----------VFLSLGT 203

Query: 215 M---LMLFLFEEIEWHRLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKSM---VALVDID 268
           M   +M+   +E+E  +L +I D LTG FNRR   +   ++ ++S + S    + ++DID
Sbjct: 204 MACAMMVIRRQELELRQLTTI-DPLTGWFNRRALNDIAVREFERSARTSSELGLLVLDID 262

Query: 269 HFKQINDSYGHDIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALD 328
           HFK+IND+YGH  GD  + +V      L      + R+GGEEF I    +D E   +  +
Sbjct: 263 HFKKINDTYGHVDGDEALKHVTNTCALLLRGYDYLFRFGGEEFVILLPGSDHECTRKLAN 322

Query: 329 SVRDAI-SVGFHVEQQPLKVSVSIG-AVIFESSHEYGEVLRQADKALYQAKQQGRNRI 384
            +R  I S    + Q  + +++SIG A   E    + ++L +AD ALY AKQ GR+R+
Sbjct: 323 RLRLKIQSEPVTLGQDRVALTISIGVAQRRERDQSWLQILERADSALYHAKQSGRDRV 380