Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 101/389 (25%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 8   MMDLSFLEIATVINNIACSAIAALFLYMLRSKLIEHKLDTATWFVLLFLAYGLAYTTSSL 67
           M+D + + +   + N+      A +    R    +H++    W     L  G+     +L
Sbjct: 1   MIDTTTMMLVLGLGNLLFGLTMAAY----RQPAADHRV-MRLWIAAQVLK-GIGTLLVTL 54

Query: 68  RFILPMGFAIFVNNLLYQLGGYCMLFAVLRWYQKPIKSG--LYLLMMAHSLLFALLLYLL 125
           R  + +  +IF  N L  +G Y +  A  R Y K   +   L LL++ + +LF       
Sbjct: 55  RGEVGLSLSIFGGNSLIFIG-YGLEVAAYRAYAKRPNADALLPLLIVGYLVLFNGAA--- 110

Query: 126 FRLNPEDIGLRIL--IASLSLSSVYLISAIVAAKNGQRGRPEQTLFAVVLAMMMVMLYVP 183
             + P D     L  ++S  L+S+  ++     +  +   P +TL     A++ +     
Sbjct: 111 -GITPPDAPRNHLFFLSSAMLASLGFLNCWFLLRAKRPPSPVKTLLISSNALLGLAAVGR 169

Query: 184 FVAYQTLPLLAVFRAST--IVVQNLFF-FIILGTMLMLFLFEEIEWHRLRSIQD--ELTG 238
            V       L+ F  S   +VV  L + F+I      L L +E     LR + D  ++TG
Sbjct: 170 AVGSLLAGPLSPFANSPTHLVVYGLAYAFMITNGFGFLLLVKEDTDAALRRLADTDQMTG 229

Query: 239 AFNRRHFKEQVQQKLKQSKQ---KSMVALVDIDHFKQINDSYGHDIGDSVITYVVRHLES 295
             NRRHF    Q+  K + +    + + + D+DHFKQ+NDS GH  GD+ +  + R++  
Sbjct: 230 LANRRHFLTASQEAWKLAGRLGRPTALMMFDVDHFKQVNDSQGHAAGDAALVDLARNVRE 289

Query: 296 LALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVGFHVEQQPLKVSVSIGAVI 355
           +     +  R GGEEFAI     D    +   + VR A++       +   +++S+G  I
Sbjct: 290 VLRDIDIFGRMGGEEFAITLPGCDLVAAAVIAERVRRAVA---ESRGEGPAITISLGLTI 346

Query: 356 FESSHEYGEVLRQADKALYQAKQQGRNRI 384
             +   +   L++AD  LYQAK  GRNR+
Sbjct: 347 LVAGEPFDTALKRADHGLYQAKAAGRNRV 375