Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 25/227 (11%)

Query: 184 FVAYQTLPLLAVFRAST-----------IVVQNLFFFIILGT-MLMLFLFEEIEWHRLR- 230
           F   + LPL+ V   S            IVV  + F + LG   +++ L  E    RL  
Sbjct: 265 FAHVENLPLIVVVALSANEVYGGWIQAAIVVGGITFVLCLGVGAVVVLLLREFRQRRLTE 324

Query: 231 ------SIQDELTGAFNRRHFKEQVQQKLKQS---KQKSMVALVDIDHFKQINDSYGHDI 281
                 ++ D LTG  NRRH +E ++ +  +S   +Q   + ++D+DHFK  ND +GH I
Sbjct: 325 SALSELAVTDGLTGLCNRRHLEEVLRVECARSARNQQPLALLMIDVDHFKAFNDRHGHRI 384

Query: 282 GDSVITYVVRHLESLALTECLV-ARYGGEEFAIFARENDFERVSQALDSVRDAISVGFHV 340
           GD V+  +   + +L      V ARYGGEEFA+   + D     +  +++R  ++    V
Sbjct: 385 GDGVLVDLAVIIRALLKRPADVGARYGGEEFAVILPDTDLAGGLRVAEAIRARMAGRPPV 444

Query: 341 EQQPLKVSVSIGAV--IFESSHEYGEVLRQADKALYQAKQQGRNRIM 385
            Q     +VSIG V  I    +   +++  ADKALY AK  GRNR++
Sbjct: 445 GQDLRAGTVSIGVVSRILTPGYGVDDLVMDADKALYAAKGAGRNRVV 491