Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 7/158 (4%)

Query: 234 DELTGAFNRRHFKEQVQQKLKQSKQKSM---VALVDIDHFKQINDSYGHDIGDSVITYVV 290
           D LTG  NR  F++++Q + + S+++     + ++DID FK IND+YGH  GD  +  + 
Sbjct: 456 DSLTGVKNRAAFEKRLQAEGRLSRRQQTPLAILMIDIDRFKAINDTYGHLAGDQALKTIA 515

Query: 291 RHL-ESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAIS---VGFHVEQQPLK 346
           + L E L     LV+R+GGEEFA+       +   Q  + +R  +S   + +  +  PL 
Sbjct: 516 QALKEKLRRPSDLVSRFGGEEFAMILPNTSCDGALQVAELMRSTVSELPLAWGEQAIPLT 575

Query: 347 VSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRI 384
           +S+ I A +         ++ QADKALY+AK +GRNR+
Sbjct: 576 ISIGICAEVIVDDQHTQLLVDQADKALYRAKHEGRNRV 613