Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (253), Expect = 2e-26
 Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 4/156 (2%)

Query: 234 DELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVVRHL 293
           D LTGA NRR F + ++  L QS + + + L D+DHFK  ND+YGH +GD+V+  V + L
Sbjct: 182 DALTGALNRRAFDQDLKGLLAQSPEGTCLILADVDHFKSFNDTYGHHLGDNVLKAVAKRL 241

Query: 294 ESLALTECLVARYGGEEFAIFARENDFERVSQALDSVR---DAISVGFHVEQQPL-KVSV 349
                    + RYGGEEFA+    +   +     D++R   + IS+    + Q + K+S 
Sbjct: 242 NESCRDGVKLYRYGGEEFALIVPNSHQRKARHLADAMRRTLEKISLKDRRKNQTIDKISA 301

Query: 350 SIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIM 385
           S G   +++   +  ++ + D  LY AK+ GRNR+M
Sbjct: 302 SFGVSEWQAKDTFESLIERTDGFLYDAKRLGRNRVM 337