Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 7/155 (4%)

Query: 234 DELTGAFNRRHFKEQVQQKLKQSK---QKSMVALVDIDHFKQINDSYGHDIGDSVITYVV 290
           D LT   NRRH++  +Q++  +     + + + + DIDHFK+IND+YGH  GD VI +V 
Sbjct: 159 DGLTQLHNRRHWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHIAGDRVIQHVS 218

Query: 291 RHL-ESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISVG-FHVEQQPLKVS 348
             L +SL  T+C   RYGGEEF++     + E      D +R+ I       E   LKV+
Sbjct: 219 HILRQSLRDTDC-AGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELRFESAILKVT 277

Query: 349 VSIGAV-IFESSHEYGEVLRQADKALYQAKQQGRN 382
           VSIG   I E      + L QAD ALYQAKQ+GRN
Sbjct: 278 VSIGICGIDEHLSNSAQWLGQADSALYQAKQKGRN 312