Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (288), Expect = 3e-30
 Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 4/157 (2%)

Query: 234 DELTGAFNRRHFKEQVQQ---KLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVV 290
           D+LTGA NR+ F+E   Q   K K S+    + L+DIDHFK++NDSYGH +GD V+  V 
Sbjct: 327 DKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHSVGDLVLKTVT 386

Query: 291 RHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAISV-GFHVEQQPLKVSV 349
             L S    + ++ R+GGEEF +   E D  R ++  +  RD+IS     V    + ++V
Sbjct: 387 NLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQRELKVNGVHIAITV 446

Query: 350 SIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIML 386
           SIG   ++      +++++AD ALYQAK+ GRN+++L
Sbjct: 447 SIGVAEYQKLEPAEDLIKRADLALYQAKEAGRNQVVL 483