Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (258), Expect = 1e-26
 Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 9/165 (5%)

Query: 230 RSIQDELTGAFNRRHFKEQVQQKLKQSK-QKSMVALV--DIDHFKQINDSYGHDIGDSVI 286
           +S  D LTG  NR  F +++  + + S+ Q++ +AL+  DID FK IND +GH  GD  +
Sbjct: 453 QSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQAL 512

Query: 287 TYVVRHLES-LALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAIS-VGFHVEQQP 344
             + + L+  L     LV+R+GGEEFAI       +   Q  +S+RD +S +G   E +P
Sbjct: 513 KLIAQTLQQHLKRPTDLVSRFGGEEFAIILPNTTADGALQVAESIRDTVSCIGLTWEGKP 572

Query: 345 LKVSVSIGA---VIFESSHEYGEVLRQADKALYQAKQQGRNRIML 386
           + ++VSIG    VI    H   E+L QADKALYQAK  GRN++ L
Sbjct: 573 IPLTVSIGVSADVIMNEQHST-ELLEQADKALYQAKNSGRNQVKL 616