Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 6/161 (3%)

Query: 234 DELTGAFNRR----HFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGHDIGDSVITYV 289
           D LTG  NRR     F+++ Q+ L+ +   S++ L DIDHFK IND++GH+ GD V+  +
Sbjct: 199 DPLTGLANRRSLCERFEQERQRSLRNNTPLSLI-LCDIDHFKTINDTHGHECGDYVLRKL 257

Query: 290 VRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAI-SVGFHVEQQPLKVS 348
              L +    +  V R+GGEEF +   + D +  ++  + +R    S  F     P++V+
Sbjct: 258 ADMLRTNMRAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTLTESYPFSYHGIPIRVT 317

Query: 349 VSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIMLQDV 389
           +  G             +R+AD+ LY AK+QGRNR++  D+
Sbjct: 318 LCFGVHQCSREGHTDYHIRKADRKLYMAKEQGRNRVVSGDI 358