Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  103 bits (256), Expect = 1e-26
 Identities = 100/370 (27%), Positives = 176/370 (47%), Gaps = 72/370 (19%)

Query: 63  TTSSLRFILPMGFA--IFVNNLLYQLGG----------YCMLFAVLRWYQKPIKSGLYLL 110
           TT+ L  ++P+GFA  +F +    +L G          + ++ A+L +  K +K      
Sbjct: 37  TTAILLLLIPLGFAEGLFDHITTPELNGELLELRLYMFFLIIPAILTFKAKSVK------ 90

Query: 111 MMAHSLLFALLLYLLFRLNPEDIGLRILIAS-LSLSSVYLISAIVAAKNGQRGRPEQTLF 169
            +A + +   ++++ F        L I +A  L   ++Y ++ +          P    F
Sbjct: 91  -IATATIIVTVIFISF--------LSIKMAEILGEEAIYTVTTVAIY-------PFLIFF 134

Query: 170 AVVLAMMMVMLYVPFVAYQTLPLLAVFRASTIVVQNLFFFII----LGTMLMLFLFEEIE 225
            ++   + + +   F A+  +    +  A+ + +QN++F I     L  +L++ +F    
Sbjct: 135 ILIGLSIYIQITALFSAFLFVIHYKLDAATNMDLQNIYFQIAFLYSLAALLVMLIFSWSY 194

Query: 226 WHRL--------RSIQDELTGAFNRRHFKEQVQQKL-KQSKQKSMVALV--DIDHFKQIN 274
           ++R          S  D LTG  NRRHF   ++ ++ + S+  S  AL+  DID FK+IN
Sbjct: 195 YNRYCLELALEKGSRTDPLTGVANRRHFDSLLKSEVNRNSRFGSACALIILDIDFFKRIN 254

Query: 275 DSYGHDIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVRDAI 334
           D+YGH  GDSVI  +     +L+    LVAR GGEEFAI   + +        + +R   
Sbjct: 255 DTYGHPTGDSVICSLANFCVTLSRETDLVARLGGEEFAIILPDTNISSAKNLGERIR--- 311

Query: 335 SVGFHVEQQPL----------KVSVSIGAV----IFESSHEY--GEVLRQADKALYQAKQ 378
               HVE Q L           +S+ I A+    I ++++E+   ++++ AD ALY+AK+
Sbjct: 312 ---LHVENQSLISETGEKVIWTISLGISALQEHKITKNNNEFIAEQLIQHADTALYEAKK 368

Query: 379 QGRNRIMLQD 388
            GRNR +L D
Sbjct: 369 GGRNRTVLYD 378