Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  100 bits (249), Expect = 6e-26
 Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 4/170 (2%)

Query: 220 LFEEIEWHRLRSIQDELTGAFNRRHFKEQVQQKLKQSKQKSMVALVDIDHFKQINDSYGH 279
           L +++E      + D LTG  NRR F   +   L Q+ + + + LVDIDHFK  ND+YGH
Sbjct: 168 LKQKLEKSEKDVLYDALTGCLNRRAFDADLAGMLAQAPEGTCLILVDIDHFKAFNDNYGH 227

Query: 280 DIGDSVITYVVRHLESLALTECLVARYGGEEFAIFARENDFERVSQALDSVR---DAISV 336
            +GD V+  V + L+      C + R+GGEEFAI   ++      Q  +++R   + +S+
Sbjct: 228 QLGDQVLKAVSKRLQEACRDGCKLYRFGGEEFAIIVPKSQLRIARQLAEAMRRGLEKLSL 287

Query: 337 GFHVEQQPL-KVSVSIGAVIFESSHEYGEVLRQADKALYQAKQQGRNRIM 385
               + Q +  ++ S G   ++       ++ +AD  LY+AK+ GRNR+M
Sbjct: 288 KDRRKDQRIDNITASFGVAQWQEKQVAIHLIERADMLLYEAKRLGRNRVM 337