Pairwise Alignments

Query, 392 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (255), Expect = 1e-26
 Identities = 63/162 (38%), Positives = 99/162 (61%), Gaps = 13/162 (8%)

Query: 234 DELTGAFNRRHFKEQVQQKLKQ---SKQKSMVALVDIDHFKQINDSYGHDIGDSVITYVV 290
           D LTGA NRR F ++++Q + +   + Q     L+DIDHFK +ND +GH  GD V+  +V
Sbjct: 184 DHLTGAANRRVFTQKIRQAMTEFHENGQSFFFGLMDIDHFKMLNDQFGHSAGDYVLQRIV 243

Query: 291 RHLESLALTECLVARYGGEEFA-IFARENDFERVSQALDSVRDAISV-GFHVEQQPLKVS 348
              E++  +     R GGEEFA IF  ++++E + +  + +R+AI++     +  P+ VS
Sbjct: 244 AISETMMTSPGKFFRIGGEEFAIIFPEQSEYEPL-RFFNDIREAIALAAMDYDGIPISVS 302

Query: 349 VSIGAVIFESSHEYG----EVLRQADKALYQAKQQGRNRIML 386
           VSIG   F + H +      +LR++DKALYQAK  GRNR+++
Sbjct: 303 VSIG---FTAMHIHDNTPESLLRRSDKALYQAKLAGRNRVLM 341