Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  145 bits (367), Expect = 2e-39
 Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 3/233 (1%)

Query: 195 GCKTLQEGIEQM-AKGDLASRISTQNNEQEFVQLTQFFNQMKASLQSTTVTKDELQAEVA 253
           GC  L  G + + A+ D    +    N Q              +++ T   K+ LQ   A
Sbjct: 211 GCNDLPPGFDDLVARPDAPCWLGVPLNSQSGTIGALIVKSAPDNVRYTEQDKELLQYVCA 270

Query: 254 RKTAKLERQK--AELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDK 311
           + T  +ER++  A L+ +++ D LT + NR   +++   AL  A+ ++ ++ALL+ DLD+
Sbjct: 271 QITVAIERKQLHARLQHMAQYDQLTQVPNRELLRERFKCALATARAASGRMALLYIDLDR 330

Query: 312 FKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAY 371
           FK+INDT GH VGD++LQ +A RLKG IR++D   R+GGDEFVV L  +Q  +       
Sbjct: 331 FKQINDTYGHGVGDMLLQAVANRLKGCIRDTDTVARIGGDEFVVLLHSIQALADAQRVQE 390

Query: 372 QMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKHQS 424
           ++   L +PL+L+   L I  SIGVA +P+  T+   L R ADEAMY AK Q+
Sbjct: 391 KIRHALAQPLRLDGHCLSIEPSIGVACFPDHGTEDVALFRHADEAMYAAKRQN 443