Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (319), Expect = 1e-33
 Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 2/167 (1%)

Query: 264 AELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEINDTKGHEV 323
           A+++ LS  D+LTG+ NR    + L  AL+ AK  +  L LL  DLD FK IND+ GH  
Sbjct: 424 AQVQHLSMHDALTGLPNRNKLARHLDDALV-AKEHSAPLTLLMVDLDNFKPINDSLGHPA 482

Query: 324 GDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEKLQKPLQL 383
           GD VL E+AQRL+   RE D   RLGGDEFVV L+ ++  + +     ++++ LQ+P+  
Sbjct: 483 GDAVLLEVAQRLRDCTREQDLVARLGGDEFVVVLNGMEHTTEIDRFCERLIDSLQQPILY 542

Query: 384 NQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKHQSGNTVYC 430
              SL IG SIG+A+   Q     EL+R AD A+Y AK + G   +C
Sbjct: 543 ETHSLHIGASIGIAVSRRQGYVPGELIRCADIALYQAKSE-GKKTWC 588