Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  136 bits (343), Expect = 3e-36
 Identities = 69/170 (40%), Positives = 111/170 (65%), Gaps = 2/170 (1%)

Query: 261 RQKAE--LRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEINDT 318
           R+K E  LR+L+  D LTG+ NR  FK++L  A  + +R+   +A+L+ DLD+FK +N++
Sbjct: 516 RRKIEERLRYLTHYDDLTGLANRGLFKERLHEACQRVRRNGRNMAVLYIDLDRFKLLNES 575

Query: 319 KGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEKLQ 378
            GHE  D +L+E+++RL  ++ E+D   RL GDEFVV LD     S + +   ++L++++
Sbjct: 576 LGHEAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLSSLAHLGSRLLQRIR 635

Query: 379 KPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKHQSGNTV 428
           KP+ ++++ L I  SIGV+L P+ +     LLR A+ AM  AKH  GNT+
Sbjct: 636 KPMVIDEQELVISASIGVSLLPDNSRDAEALLRQANIAMQQAKHLGGNTL 685