Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  129 bits (325), Expect = 3e-34
 Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 261 RQKAELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEINDTKG 320
           + +A +++LS+ D LTG+ NR   +  L   L    RS   + LL+ DLD+FK +NDT G
Sbjct: 422 KAQARVQYLSQHDPLTGLPNRSRLRDYLEQNLASL-RSGSTMTLLYIDLDRFKPVNDTLG 480

Query: 321 HEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEKLQKP 380
           H  GD VL  +A RL+   R+ D   RLGGDEFVV L  + +   +     +++E L  P
Sbjct: 481 HAAGDEVLMGVASRLRERTRDGDLVARLGGDEFVVALHRMSEDEDIDRLCNRIIEALSSP 540

Query: 381 LQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKHQSGNT--VYCAHQDKHDH 438
                  + IG SIGVAL P  ATQ  ELLR AD A+Y AK     T   Y    D+  H
Sbjct: 541 FAYENHQISIGASIGVALAPMDATQANELLRCADIALYQAKDAGRGTWRAYGRDMDQRLH 600

Query: 439 TSL 441
             L
Sbjct: 601 ERL 603