Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  140 bits (354), Expect = 6e-38
 Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 7/195 (3%)

Query: 238 LQSTTVTKDELQAEV-----ARKTAKLERQK--AELRFLSERDSLTGILNRRAFKQQLSH 290
           L+ST V   E   E+      +    +ERQ+  A L  +++ D LTG+ NR  F+ +LS 
Sbjct: 245 LKSTAVPYTEKDQELLQFVSTQVVTAIERQQLYARLHRMAQYDELTGLPNRACFRDRLST 304

Query: 291 ALIKAKRSNMKLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGG 350
           AL + +R+  ++ALL+ DLD+FK+INDT GH  GD +L+ +A RL   +R++D   RLGG
Sbjct: 305 ALARVRRNGGRIALLYVDLDRFKQINDTYGHGGGDQLLRAVADRLTACVRDTDTVARLGG 364

Query: 351 DEFVVCLDLLQDHSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELL 410
           DEFVV L+ + +         ++    ++PL +   SLEIG+SIG+ALYPE      +LL
Sbjct: 365 DEFVVLLESIAEPEDAQRVVEKVRSAFEQPLSITGHSLEIGMSIGIALYPEDGETETQLL 424

Query: 411 RIADEAMYTAKHQSG 425
           + AD+ MY  K + G
Sbjct: 425 KQADDRMYLMKARGG 439