Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (575), Expect = 1e-63
 Identities = 139/421 (33%), Positives = 234/421 (55%), Gaps = 12/421 (2%)

Query: 4   SLNRKMTLLFIASLLLVGFIAFSLLNLDQRQQQTNAELDTILEIQNSIAMLRSQLWVFLQ 63
           +L++++ L  + S LL+  +   LL L     +      +  + Q +++ +  +LW   +
Sbjct: 2   TLSKRLKLSVVISGLLLFLLMGILLYLVGMDVRGYRHSYSYQQAQVTLSRMSGELWQLNR 61

Query: 64  YNDAHSLEQVYRAQQVL---AGQLEMETVFGQHLAGIQRMNNSLAGLLEQERYMAEESGI 120
           Y D  +L++     Q+L    G LE +  +   L+ I++ N++L  L++       E+  
Sbjct: 62  YEDLQALDKARELTQLLDEQIGFLEKDAQYNPLLSHIKKTNHNLKLLMQLYPSAPREN-- 119

Query: 121 TKLVDGIGTYELLHSRYNILVQNMNEELAYFQRQVMEESINNQRYLLLTTMAHLLLFSSV 180
                 + T  +L++R+N L+  M +E+   + +++EE   +++YLLL     L L  S 
Sbjct: 120 ------VETAAMLNARFNTLLLTMQDEMGEIRHRLVEEQFYSKQYLLLLIAVILFLSMSA 173

Query: 181 VCGIALVVLRRFRHGCKTLQEGIEQMAKGDLASRISTQNNEQEFVQLTQFFNQMKASLQS 240
           V    L  +  F+ G  +L+ GI  +AKG+L +R+  +++  EF +L++ FN M   LQ 
Sbjct: 174 VILFNLKTMSVFKQGMLSLESGIRDLAKGNLETRVC-EDSGSEFTELSKHFNWMTQELQQ 232

Query: 241 TTVTKDELQAEVARKTAKLERQKAELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNM 300
            TV++D+LQ EV ++T  L+ QK +L++ +E DSLT + +R AF + L  +L +  RSN 
Sbjct: 233 ITVSRDKLQDEVNKRTEVLQLQKDKLKYEAEHDSLTRVYSRYAFHRLLEQSLKRLARSNG 292

Query: 301 KLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLL 360
             ALLF D+DKFK IND  GH +GD VL  +AQR+  ++RESD   R+GGDEF+V L+ +
Sbjct: 293 TGALLFIDIDKFKPINDNYGHSIGDHVLVTVAQRISHTLRESDMVARIGGDEFIVWLEPI 352

Query: 361 QDHSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTA 420
           +    +     ++L+KL   +      L I VSIG A YP+  T + EL+ +AD  MY  
Sbjct: 353 EHTLQLEVVIKKLLDKLHLDINFANVHLLIDVSIGAACYPQDGTGIEELINVADRNMYAC 412

Query: 421 K 421
           K
Sbjct: 413 K 413