Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (326), Expect = 2e-34
 Identities = 95/268 (35%), Positives = 144/268 (53%), Gaps = 32/268 (11%)

Query: 203 IEQMAKGDLA--SRISTQNNEQEFVQLTQFFNQ-------MKASLQSTTVTKDELQAEVA 253
           I+ + KG L   S   +Q  +++ + L  F +Q        K S +S   + ++L+ +VA
Sbjct: 360 IQGIVKGALTIYSFTPSQTYQEKDLDLLTFVSQHIAAAIERKLSAESLKQSYEQLEEKVA 419

Query: 254 RKTAKL------------ERQKAELRFLSE--RDSLTGILNRRAFKQQLSHALIKAKR-S 298
           ++T  L            +R+K E + + +   D+LTG+ NR  F ++L+ A+   +R +
Sbjct: 420 QRTRALAMLNQDLEKEIAQRRKVEQQLVHDASHDTLTGLPNRAMFMERLAQAVKHVRRHA 479

Query: 299 NMKLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLD 358
             + ALLF DLD+FK INDT GH  GD  L E A+RL   IR +D  GR+GGDEFV+ LD
Sbjct: 480 RDRFALLFIDLDRFKLINDTLGHLQGDRFLIETARRLNLCIRSNDTLGRIGGDEFVILLD 539

Query: 359 LLQDHSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPE-LLRIADEAM 417
            +  +S  I  A ++L +L +P QL+ +S   G SIG+A     +    E LL+ AD AM
Sbjct: 540 SINTNSDAIEVAERILGELSEPYQLSNQSFTSGASIGIAFSGHSSGDTSESLLKDADAAM 599

Query: 418 YTAKHQSGNTVY------CAHQDKHDHT 439
           Y AK  +G   +       +HQ  HD T
Sbjct: 600 YQAK-SNGKGCFVIFDHNTSHQQSHDIT 626