Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  126 bits (317), Expect = 3e-33
 Identities = 72/183 (39%), Positives = 99/183 (54%), Gaps = 4/183 (2%)

Query: 243 VTKDELQAEVARKTAKLERQKAELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKL 302
           V    L+ E+ R+ A  +R    L+ ++  D LT + NR     +LS AL+  +R     
Sbjct: 753 VVNRRLKREITRRIAAEKR----LQHVASHDVLTQLPNRGLLDDRLSQALLSHRRDQSHF 808

Query: 303 ALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQD 362
           ALLF DLD FK++ND  GH +GD +L  +A  L  +IR SD   R GGDEFV+ L+ +QD
Sbjct: 809 ALLFIDLDGFKQVNDQHGHPIGDALLLRVAGLLTQAIRHSDTVARFGGDEFVILLNRVQD 868

Query: 363 HSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKH 422
                  A  +L  L  P  +   ++EI VSIGV +YP       ELL+ AD+ MY AK 
Sbjct: 869 LDAATQVADNILHSLSSPFTIEGVTVEIAVSIGVVIYPRDGDTAIELLKKADQLMYQAKT 928

Query: 423 QSG 425
             G
Sbjct: 929 VGG 931