Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (345), Expect = 7e-37
 Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 2/172 (1%)

Query: 259 LERQK--AELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEIN 316
           +ER++  A L  ++  D LT + NR  F  +   AL ++ R +   +LL+ DLDKFK +N
Sbjct: 274 IERRQMLARLEQIALYDQLTHLPNRELFYDRFQKALSRSHRESSYFSLLYLDLDKFKWVN 333

Query: 317 DTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEK 376
           DT GH VGDL+LQ  AQRL G +R SD   R GGDEFV+ L+ +      +  A+++LE 
Sbjct: 334 DTYGHGVGDLLLQITAQRLLGCVRASDTVARFGGDEFVILLERVDSAHNTLLVAHKVLEA 393

Query: 377 LQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAKHQSGNTV 428
           L +P +L ++ L +  SIGVALYPE      +LL  AD AMY AK   GN +
Sbjct: 394 LNQPFELTEQQLYVFPSIGVALYPEHGKDEQQLLSCADAAMYKAKKNGGNRI 445