Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (323), Expect = 3e-34
 Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 11/195 (5%)

Query: 245 KDELQAEVARKTAKLERQKA-----------ELRFLSERDSLTGILNRRAFKQQLSHALI 293
           KDE+ + +  ++ +  +Q+A           +L+ L+E DSLT ++NR  F+  L+ A+ 
Sbjct: 106 KDEVNSRILSRSIRYAKQRASMALALRNSHEKLKELAEHDSLTKLMNRYGFELCLNRAIA 165

Query: 294 KAKRSNMKLALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEF 353
           + KRSN  LA++  DLD FK INDT GH+ GD++L ++A RL   +R+ D   RLGGDEF
Sbjct: 166 RVKRSNDLLAVILLDLDDFKAINDTLGHQTGDILLVKVASRLSTVLRDGDVIARLGGDEF 225

Query: 354 VVCLDLLQDHSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIA 413
           VV +         +  A ++L+  ++   L    + IG SIGVA Y E A+   EL++ A
Sbjct: 226 VVLVTDNDYKYFPMIVANRLLKAFEEVFCLGDNDVMIGASIGVAFYNEAASDSSELMKCA 285

Query: 414 DEAMYTAKHQSGNTV 428
           D AMY AK    N +
Sbjct: 286 DIAMYRAKKMGRNQI 300