Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (384), Expect = 7e-41
 Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 245  KDELQAEVARKTAKLERQKAE--LRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKL 302
            K E    VA  T   ER+KAE  LRFL+  D+LTG+ NR  F+ +L+HA+ +A RSN  +
Sbjct: 1055 KGETSHFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIV 1114

Query: 303  ALLFFDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQD 362
            ALLF DLD+FK IND+ GH +GDL+L+ +A RL+ ++RE D   RLGGDEF + L+ +  
Sbjct: 1115 ALLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAK 1174

Query: 363  HSGVINKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAK 421
                   + ++L+  Q P  L+ +SL I  SIG++LYP  A  V  L++ AD AMY AK
Sbjct: 1175 TKAATLISEKVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAK 1233