Pairwise Alignments

Query, 443 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (332), Expect = 3e-35
 Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 30/235 (12%)

Query: 196 CKTLQEG-------IEQMAKG--DLASRISTQNNEQEFVQLTQFFNQMKASLQSTTVTKD 246
           C  LQ+G       I++ A G   L+ RI+T  NE    +LT F       +  T +++ 
Sbjct: 439 CNLLQQGEQWQGELIKETASGYLPLSVRINTVRNEHN--RLTHFV------IVITDISER 490

Query: 247 ELQAEVARKTAKLERQKAELRFLSERDSLTGILNRRAFKQQLSHALIKAKRSNMKLALLF 306
           + + E              LR ++  D+LT + NR  F  +L  A++ A+RS+   A+LF
Sbjct: 491 KAEEE-------------HLRHIAHHDALTNLPNRVLFHTKLEQAIVHAQRSDGIFAILF 537

Query: 307 FDLDKFKEINDTKGHEVGDLVLQEIAQRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGV 366
            DLD FK +ND  GH+VGD +LQE+A+RL  SIR+ D   RLGGDEFV+ L+ L +   V
Sbjct: 538 LDLDNFKPVNDEFGHDVGDKLLQEVAKRLTSSIRQIDTITRLGGDEFVILLEHLPNEESV 597

Query: 367 INKAYQMLEKLQKPLQLNQESLEIGVSIGVALYPEQATQVPELLRIADEAMYTAK 421
                ++ + L  P  +++  L IGVSIG A+YP        L+  AD+AMY  K
Sbjct: 598 PILIRKITQALTAPYIIHKHKLHIGVSIGSAIYPCHGIDAKSLINYADQAMYVVK 652