Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 23/260 (8%)

Query: 30  LATAISVNANAAPIKIAVSQTPLSS--PFYLADQLGFFKQQGIDVEL-----VACSGGVQ 82
           +AT  S  A+ A  K+ +     +   PFY+AD+   FK  G+DV+L      A      
Sbjct: 18  VATLFSPLASQAAEKLKIGTVVWAGYGPFYVADKKDLFKPHGLDVDLQFFNDPALIPTAM 77

Query: 83  CSQALFQGAVSYATASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLH 142
            S+AL  G ++Y     SVA          +++     +  D     +   +I+SV D  
Sbjct: 78  LSRALDGGMLTYDQVVASVAKGLKHR----VVMPIDFSNGGD---AIVADASIQSVTDFR 130

Query: 143 NKRVGMIRASASEFYFDSLLLANNLKGIPIDKVYGTADQLYQQLFDKQLDAISIWEPWGY 202
            K+VG    S S+F     L  N +    I+ V  T + +   +    L     +EP   
Sbjct: 131 GKKVGFNPLSPSDFLLAYALQQNGMSDKDINAVNMTPEGIPGAMASGNLPIGVTYEPNVS 190

Query: 203 KI---GVAAESKV--TNLSLPGIYTLSFNLLTMKPTTEEEKQRSL-AILKALKQAIDWIH 256
           +I   G   + KV  ++   PG+ T   ++L        +K  ++ A+++     + ++ 
Sbjct: 191 QILSMGGGGKFKVVYSSKDAPGLIT---DVLVFDEAVIAKKPAAIKAMIQGYLDGLAYMQ 247

Query: 257 QNPERTRYRVAGVLNIDEKQ 276
            +PE +   +  VL +  ++
Sbjct: 248 AHPEESAEIIGEVLGVSAEE 267