Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 25/266 (9%)

Query: 14  LSILAIAFVAWRWLTPLATAISVNANAAPIKIAVSQTPLSSPFYLADQLGFFKQQGIDVE 73
           +SI A+AF +   +   + A +       ++   SQ  LS P  LA +LG+F   GI +E
Sbjct: 3   ISIRALAFGSLFSIGLSSLAAAEAPEPVTLRFLASQGSLS-PHELAYELGYFDDLGIKLE 61

Query: 74  LVACSGGVQCSQ-ALFQGAVSYATASESVAMFSSFERQDFLILASFVQSDNDLKLL--AL 130
            V  +GG   S  AL  G+V   +A+ +  + S     DF+        +  +K +   L
Sbjct: 62  NVGYAGGGPASLFALASGSVDIGSAATAAVINSIAGGNDFVAAFPTNGINEQVKSIFYVL 121

Query: 131 ESETIRSVADLHNKRVGMIRASASEFYFDSLLLANNLKGIP---IDKVYGTADQLYQQLF 187
           +   IR++ D+  K + +    A   Y  ++  A + KG+P    + V     QL Q L 
Sbjct: 122 DDSPIRTIEDIAGKTIAVNTLGAHLDY--AVREALHGKGLPENAANLVVVPGPQLEQTLR 179

Query: 188 DKQLD--AISIWE--------PWGYKIGVAAESKVTNLSLPGIYTLSFNLLTMKPTTEEE 237
             Q+D  A+  W+          G    V  ++ V      G   L  + +   P     
Sbjct: 180 SNQVDIAAVGYWQATFNGQIVDHGGVRAVFDDTDVLGEIAGGFAVLRRDFVEKNPVAARN 239

Query: 238 KQRSLAILKALKQAIDWIHQNPERTR 263
                  ++   +A DW  ++PE  R
Sbjct: 240 ------FVEQSARAADWSREHPEEAR 259