Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  206 bits (523), Expect = 9e-58
 Identities = 108/295 (36%), Positives = 177/295 (60%), Gaps = 2/295 (0%)

Query: 37  NANAA-PIKIAVSQTPLSSPFYLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYA 95
           +ANA   + IAVS TPLSSP  +A++ G F++ G+ V+L    GG +C  AL +     A
Sbjct: 26  SANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGLKVQLKLLQGGHRCFDALIKNEADLA 85

Query: 96  TASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMIRASASE 155
           T+SESV M+++F+R DF ++ SFV SDND+K++  +   I S+ D+    VGM++ ++SE
Sbjct: 86  TSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVRKDSGITSLTDISGHSVGMVKGTSSE 145

Query: 156 FYFDSLLLANNLKGIPIDKVYGTADQLYQQLFDKQLDAISIWEPWGYKIGVAAESKVTNL 215
           ++F+S LL + ++   I   +   ++L + L DKQLDA+S+WEP+  ++  + +S  + L
Sbjct: 146 YFFNSALLLHGVENALISARFMAPEELGKALLDKQLDAVSLWEPYASELMQSLKSDGSQL 205

Query: 216 SLPGIYTLSFNLLTMKPTTEEEKQRSLAILKALKQAIDWIHQNPERTRYRVAGVLNIDEK 275
           S  G+Y LSFNLL+M+   + ++   + +L+AL +A+  I  +P   +  V+  LN+   
Sbjct: 206 STKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDEAVASIITSPAEAKQLVSDYLNVPLP 265

Query: 276 QLRWSWQDYSFRLSLGNTLLTNLQLQGRWALENKLV-HGQLPDYRQLMADDLLSE 329
           ++   W DY F L L  TL   L  Q  WA+++  V   Q PD+R  +    LS+
Sbjct: 266 EIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGYVDQSQAPDFRDFIDKTALSQ 320