Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 19/178 (10%)

Query: 493 DQNQQDSLHGVLSRTSGLERLT------HIEACQQTEHVHL--------LALLDIDQLRQ 538
           D  ++  L G L R +  + LT      H   C + E              LLDID  ++
Sbjct: 155 DITEKKQLEGELQRLATTDVLTQSSNRRHFFECARIEFERARQFASSLAFLLLDIDDFKR 214

Query: 539 FNERHGYERGDIALQNTINTLLHQLRAKEFVCRLGDDEFLVVMPNCRRTLSETRLFVLHH 598
            N+ HG++ GD  LQ         LR  +   R+G +EF  V+P C+  L+E     L  
Sbjct: 215 INDTHGHQMGDQVLQKVARCGASVLRQSDLFGRIGGEEFAAVLPGCQPDLAEQIAERLQR 274

Query: 599 ALNGKTPT---DAKSTVGLSVTLSYLAVESGLASFTHFYPKLDSALSIAKQSGNGGLI 653
            +     T     +  V  S+ L+YL      A  +  + + D+A+  AK+ G   +I
Sbjct: 275 EIERVVFTAENGERFRVTASLGLTYLRAND--AELSTVFARADAAMYTAKRLGKNQVI 330