Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., GGDEF domain-containing protein from Rhodanobacter denitrificans MT42

 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 126/516 (24%), Positives = 219/516 (42%), Gaps = 52/516 (10%)

Query: 173 CSQMDQRLLNAEDPLFPRYRGLHLVANNLEFLGEYEEALQTYDLLLSLLP-------DYV 225
           C  + Q  L  E    P Y     +A  LE      +AL       SLL        D++
Sbjct: 107 CRGLYQSKLTTERDALPDYEAGIRLARRLENPRLIADALTWRGSAQSLLGEQAKALFDFL 166

Query: 226 DPSGIYNDVG-------------LLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEH 272
           +   +Y  VG              +   LG+Y+ A +YL ++++    +G+      V+ 
Sbjct: 167 EAQRLYETVGNTTAAQSNLISIATIYRRLGEYDKAGEYLRQSMQSAQRKGDKQEQMVVDM 226

Query: 273 SLGDTYFKQGRYEESILYFEQAKA--HLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQH 330
            LG    ++G    ++   ++A A  H T +    G A   L L ++      + E  Q 
Sbjct: 227 QLGFLATERGDPVGAVAPLQRALALAHETGSRQSVGSAL--LALAESSNARERYAEALQQ 284

Query: 331 LFQALEYVNQHKDQHLQGLIYLSLAQAHF---KEQKYAQAIDYANQAVAISESASLPRIK 387
           +  A +      DQ   G++ L  A+AH    + +  A+  D A  +V  S +    R  
Sbjct: 285 VEAAAKEFQAVADQSNVGMLALQSAKAHAGLGQHELAAREFDLAEASVRNSRNM---RYL 341

Query: 388 AQAYLQLAKIAEAEQQYQEALSWYRQYAESELLLRNTEQRKAFEAL----DLAKAELEQK 443
           A+ Y   ++  EA  +   AL+  R   E++  L    + +    +    D  + ELE +
Sbjct: 342 AELYDARSRNQEALGKPAAALADLRLKMEADAALARMAKTQLTTLMSYQFDTERRELENR 401

Query: 444 RGVNFWRENYQALAEKYEMLKWQRVSLSLLVIVFALILPIAHYRRRKECDQNQ---QDSL 500
           +         Q LA    +  WQ +++ L  ++  L+L +A  + R+    ++    D+L
Sbjct: 402 KLAADKALKEQQLATLERVRGWQWLAILLAGLLLLLMLWLAWRQLRQSRRLHRLALTDAL 461

Query: 501 HGVLSRTSGLERLTH--IEACQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTINT 558
            G+ +R   +E   H  +E  ++ +    + +LDID  ++ N+ HG+  GD AL+  ++ 
Sbjct: 462 TGISNRRH-IEHTLHGAVEHARRGQRELAVIMLDIDHFKRVNDSHGHPAGDQALEQLVHA 520

Query: 559 LLHQLRAKEFVCRLGDDEFLVVMPNCRRTLSETRLFV---LHHALNGKTPTDAKSTVGLS 615
            L  LR  + + RLG +EFLVV+P+   T  E  L V   L   +    P      + LS
Sbjct: 521 CLGALRQHDRLGRLGGEEFLVVLPD---TDLEGGLQVAERLRACVAAARPLVNGVELQLS 577

Query: 616 VTLSYLAV---ESGLASFTHFYPKLDSALSIAKQSG 648
           ++L    +   ESG AS      + D+AL  AK +G
Sbjct: 578 ISLGVAQLRPAESGAASLVR---RADAALYHAKDNG 610