Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 80.1 bits (196), Expect = 3e-19
 Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 10/286 (3%)

Query: 308 AYVHLGLGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLIYLSLAQAHFKEQKYAQA 367
           +++H  +   Y+   N  E    L  +LE + + +   L   +Y +LA A+ ++ K  +A
Sbjct: 212 SFIHSFIATKYLRDGNTAEVYGQLKPSLETIEKTRYPRLIAEVYATLASAYLQDHKIGEA 271

Query: 368 IDYANQAVAISESASLPRIKAQAYLQLAKIAEAEQQYQEALSWYRQYAESELLLRNTEQR 427
              A + V +++     +    AY  L +IAE    Y+ AL ++ +YA+++    +  + 
Sbjct: 272 RLLAEKIVNLAKGLGNTQAVVTAYKVLYQIAELSGNYKAALDYHVKYAQADKAYLDDIKT 331

Query: 428 KAFEALDLAKAE-LEQKRGVNFWRENYQALAEKYEMLKWQ----RVSLSLLVIVFALILP 482
           K   A  LA+ +  EQK  +         L  + ++ K Q    R+ +SLL+ +  L+  
Sbjct: 332 KHL-AFQLAEHQAAEQKSRIALLDRQNNLLLTEQQLAKTQAENNRLFISLLIAIITLLGF 390

Query: 483 IAH--YRRRKECDQ-NQQDSLHGVLSRTSGLE-RLTHIEACQQTEHVHLLALLDIDQLRQ 538
            A+  +  +K   Q  + D+L  V +R    +   + +  C+ +E      L D+D  +Q
Sbjct: 391 WAYKSWTIQKRLKQLAEYDALTHVFNRGHFTQVAQSALTYCESSEVDLSYILFDLDNFKQ 450

Query: 539 FNERHGYERGDIALQNTINTLLHQLRAKEFVCRLGDDEFLVVMPNC 584
            N+++G+  GD  L+        Q R  +   R+G +EF + +P C
Sbjct: 451 INDKYGHAIGDWVLKKVAKACQAQGRKNDIFARIGGEEFCIALPGC 496