Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 111/485 (22%), Positives = 205/485 (42%), Gaps = 84/485 (17%)

Query: 197 VANNLEFLGEYEEALQTYDLLLSLLPDYVDPSG---IYNDVGLLMGTLGQYESALDYLNK 253
           +A +    G+ + A++ Y  L     D  D  G   I  ++G  +  LG+YE+AL    +
Sbjct: 222 LATSYRRFGDPQTAIKYYRKLEKGFEDTGDKDGANAIKTEIGFALEELGEYEAALKKHKE 281

Query: 254 ALEYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILYFEQAKAHLTPANYLFGLAYVHLG 313
           A +Y  +       A    ++     +  R  E+  Y + A+  +TP     G +Y  + 
Sbjct: 282 AYQYWRDTLGEEASAHTAVNVAGVLIQLHRQGEAKPYLDAAQKSITPDQ---GASYSFMR 338

Query: 314 LGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLIYLSLAQAHFKEQKYAQAIDYANQ 373
           L +A   L N                    Q+ Q L Y+ +A+  FK+ K A+ ++    
Sbjct: 339 LYQAQSALTN-------------------GQYQQALDYIDMAEETFKQIKNARGLE---- 375

Query: 374 AVAISESASLPRIKAQAYLQLAKIAEAEQQYQEALSWYRQYAESELLL-------RNTEQ 426
                          Q ++  ++I  AE+ +++A      Y ++   L       R TE 
Sbjct: 376 ---------------QLHMVHSQIFVAEKDWKQAYEALLSYIQTHKSLDATQQTNRTTEM 420

Query: 427 RKAFEALDLAKAELEQKRGVNFWRENYQALAEKYEMLKWQRVSLSLLVIVFALILPIAHY 486
           R  F    + + E +Q   +   +EN   + ++    K+ ++++ +L  +  +IL I  Y
Sbjct: 421 RTRFNTEQIER-ENQQLLELQKIKENELVILKQN---KYLQLAVIVLGCIIMIILSIVAY 476

Query: 487 RRRKECDQNQQDSLHGVLSRTSGLERLT-----------HIEACQQTEHVHLLALLDIDQ 535
           +      Q+Q+  L  +L+ T  L +L            + ++  +      + L D D 
Sbjct: 477 K------QSQKSKLLSILALTDHLTQLPNRRYTYSKGEGYFKSKDEGHQPLSIILFDADH 530

Query: 536 LRQFNERHGYERGD---IALQNTINTLLHQLRAKEFVCRLGDDEFLVVMPNCRRTLSETR 592
            ++ N+++G++ GD   IAL N  N L   +R ++ V R+G +EFLV++P    T +E  
Sbjct: 531 FKKVNDKYGHDIGDKVLIALANISNGL---MRKQDLVGRVGGEEFLVILPG---TTAEQA 584

Query: 593 LFVLHHALNGKTPTDAKST-VGLSVTLSY-LAVESGLASFTHFYPKLDSALSIAKQSG-N 649
           L V    +     ++     +   +T+S  +A   G  SF H   + D AL  AK SG N
Sbjct: 585 LNVAQRLVTTVESSNFDDVYMNFKLTISAGIACTDGDKSFEHLLKRADDALYRAKSSGRN 644

Query: 650 GGLID 654
             ++D
Sbjct: 645 CAILD 649