Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 88.6 bits (218), Expect = 8e-22
 Identities = 101/447 (22%), Positives = 186/447 (41%), Gaps = 61/447 (13%)

Query: 190 RYRGLHLVANNLEFLGEYEEA--LQTYDLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESA 247
           R R L L +N   + G YE A  L T    LS  P+  +   +Y    L+   +  Y+ A
Sbjct: 64  RARVLTLESNKEMYNGSYERAFNLLTQAEQLSHSPETQNSIYLYQATALI--AMKNYQGA 121

Query: 248 LDYLNKALEYRLEQGNPLLIAQVEH-SLGDTYFKQGRYEESILYFEQAKA---------- 296
           LD + K L+ R+EQ + + I    +  L + Y     Y+E   Y   A A          
Sbjct: 122 LDAMAKNLD-RIEQIDDVTIKMTSYLRLANLYLDLEVYDEVKRYASLAYALSRDRSPKEQ 180

Query: 297 ---------------HLTPANYLFG--------------LAYVHLGLGKAYIELNNFVEG 327
                          H   A  LF               +A    G G ++++L    + 
Sbjct: 181 CYAQLFLAVGELKLSHYHEAKQLFADTRTFCSEHNIPLIVAMADKGKGTSHLKLGELEQA 240

Query: 328 DQHLFQALEYVNQHKDQHLQGLIYLSLAQAHFKEQKYAQAIDYANQAVAISESASLPRIK 387
           ++    AL      K Q     +   LA+ +  +++   A  YA Q + + +  S+   K
Sbjct: 241 EKLFLSALAKYKTFKFQLEINDVNALLAETYLMKKEVEDAKQYAQQVIHVEDEPSVLNAK 300

Query: 388 AQAYLQLAKIAEAEQQYQEALSWYRQYAESELLLRNTEQRKAFEALDLAKAELEQK---- 443
            +AY  +A     E  YQEA  +  +Y +      +  + KA+ A  +AK E  +K    
Sbjct: 301 KRAYKMMADALALEGSYQEAYHYLDEYMQLSEADIDETKAKAY-AYQMAKFENAEKAREI 359

Query: 444 RGVNFWRENYQALAEKYEMLKWQR-------VSLSLLVIVFALILPIAHYRRRKECDQNQ 496
           + +N  R  Y A  +  E+ ++         +  S+ +I+F   + +   ++RK    +Q
Sbjct: 360 KMLNQDRALYTAQQKVVELERYNESMALMIAIGCSICLIIFGASMFV---QKRKYKRISQ 416

Query: 497 QDSLHGVLSRTSGLERLTHIEA-CQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNT 555
           +D L GVL+R +G +   ++         +  + + D+D  +  N+ +G+  GD AL+  
Sbjct: 417 RDPLTGVLNRGTGQDFAENLFVDVLAHRSMFSVVMFDLDHFKAINDTYGHSAGDWALRRV 476

Query: 556 INTLLHQLRAKEFVCRLGDDEFLVVMP 582
           ++ +   L++++   R+G +EF + +P
Sbjct: 477 VDAVTPSLKSRDLFVRMGGEEFALFLP 503