Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.6 bits (148), Expect = 8e-14
 Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 20/200 (10%)

Query: 465 WQRVSLSLLV---IVFALILPIAHYRRRKECDQNQQDSLHGVLSRTSGLERLTH--IEAC 519
           W  ++LSL+V   I+F   + +  Y+R+ E      D L G  +R    E   H  ++  
Sbjct: 292 WGNLALSLVVTIGILFISNMTLGRYQRKLEI-MASTDKLTGAANRQV-FEEYFHQALDKA 349

Query: 520 QQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTINTLLHQLRAKEFVCRLGDDEFLV 579
           + ++    + L+DID  ++ N+ +G+  GD+ L+   N L  QL+ ++ +CR G +EFLV
Sbjct: 350 KLSQTSISILLIDIDHFKKVNDSYGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLV 409

Query: 580 VMPNCRRTLSETRLFVLHHALNGKTPTDAKSTVGLSVTLSYLAVESGLASFTHFYP---- 635
           ++P     +  +R   L                G+ + ++   V  G+A +    P    
Sbjct: 410 LLPE----MDLSRAAELAERFRDSISQRELKVNGVHIAIT---VSIGVAEYQKLEPAEDL 462

Query: 636 --KLDSALSIAKQSGNGGLI 653
             + D AL  AK++G   ++
Sbjct: 463 IKRADLALYQAKEAGRNQVV 482