Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.0 bits (175), Expect = 7e-17
 Identities = 77/363 (21%), Positives = 156/363 (42%), Gaps = 15/363 (4%)

Query: 231 YNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILY 290
           Y  +  L   +G  E    Y  KAL    E  +   I      L     +   Y ++   
Sbjct: 144 YLRLASLYSAMGISEEVATYATKALALASES-DVKDICGARLYLSVHQLEIASYAQAFDE 202

Query: 291 FEQAKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQHLFQALEYVNQHKDQHLQGLI 350
           F+  +++   + Y         G+G++ + LN       +L  +L+       +     +
Sbjct: 203 FKSTRSYCESSGYPLIANIALKGMGESSLRLNEPQLAISYLLDSLKGYESFNFELEINSV 262

Query: 351 YLSLAQAHFKEQKYAQAIDYANQAVAISESASLPRIKAQAYLQLAKIAEAEQQYQEALSW 410
           +  L++A+   Q   +A  +A   + + + +S   +K  A   LAKI   +QQ+++A  +
Sbjct: 263 HELLSEAYLLLQDSTKAELHAQYVMNLVDDSSNTELKHGASGVLAKIYAQKQQFEQAYEY 322

Query: 411 YRQYAESELLLRNTEQRKAFEALDLAKAEL-EQKRGVNFWRENYQALAEKYEMLKWQRVS 469
            R+      L+ +  + K   A   AK    EQ R +N   +  +    + +M+K +  +
Sbjct: 323 SRKEQHYNQLIFDESRMKTL-AYQAAKFNADEQAREINLLNKERELYIAQ-QMVKEREYT 380

Query: 470 LSLLVIVF--------ALILPIAHYRRRKECDQNQQDSLHGVLSRTSG--LERLTHIEAC 519
             L+ I          A++L + + ++R+     + D+L GVL+R +G  L     ++A 
Sbjct: 381 NMLMFITILVGGLFFLAILLVVGNLQKRRFMRMAKMDALTGVLNRGAGQDLGENMFVQAA 440

Query: 520 QQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTINTLLHQLRAKEFVCRLGDDEFLV 579
            +    + + L D+D  ++ N+ +G+  GD AL+  +  L   +R  +   R+G +EF +
Sbjct: 441 ARGGD-YCVILFDLDHFKRINDSYGHGTGDWALKKVVEVLKPHIRNGDVFARIGGEEFAL 499

Query: 580 VMP 582
            +P
Sbjct: 500 FLP 502