Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.1 bits (131), Expect = 2e-11
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 23/164 (14%)

Query: 498  DSLHGVLSRTSGLERLTH-IEACQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTI 556
            D+L G+ +RT   +RL H I    ++ ++  L  LD+D+ +  N+  G+  GD+ L+   
Sbjct: 1085 DTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGDLLLKAVA 1144

Query: 557  NTLLHQLRAKEFVCRLGDDEFLVVMPNCRRTLSET-------RLFVLHHALNGKT----- 604
            + L   +R  + V RLG DEF +++    +T + T       + F     L+ K+     
Sbjct: 1145 HRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAFQAPFLLDDKSLNIST 1204

Query: 605  -------PTDAK---STVGLSVTLSYLAVESGLASFTHFYPKLD 638
                   P DAK   S +  + T  Y A   G  +F  +  KL+
Sbjct: 1205 SIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFYTNKLN 1248