Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.2 bits (139), Expect = 9e-13
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)

Query: 445 GVNFWRENYQALAEKYEMLKWQRVSLSLLV--IVFALILPIAHYRRRKECDQNQQDSLHG 502
           G N +     ALAE   + K Q  +L  ++  +  AL   + +   + + D +    LH 
Sbjct: 264 GKNTFGAIAMALAETPALGKDQAQALDSVMRHLTLALRNAVVYREIKLQADHDALTQLH- 322

Query: 503 VLSRTSGLERLTH-IEACQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTINTLLH 561
             +R S   RL   ++  Q+      L +LDID  +  N+ +G+  GD  L+    T+ +
Sbjct: 323 --NRRSFDHRLAEEVDRHQRYGMPMTLLMLDIDHFKAVNDTYGHPAGDAVLREVAQTMRN 380

Query: 562 QLRAKEFVCRLGDDEFLVVMPN----CRRTLSE---TRLFVLHHALNGKTPTDAKSTVGL 614
             R  +F  R G +EF V++P+    C R  +E    RL      ++GKT       V +
Sbjct: 381 ACRTTDFAARYGGEEFCVILPHTDGKCGRIFAERLRKRLASSRVEVDGKT-----IAVTV 435

Query: 615 SVTLSYLAVESGLASFTHFYPKLDSALSIAKQSGNGGLIDAADP 658
           S+ L+ L+  + L S      + D AL  AK +G   + +A +P
Sbjct: 436 SIGLATLSAAAPL-SPERLVCEADGALYAAKAAGRNIVCEAQEP 478