Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 27/243 (11%)

Query: 419 LLLRNTEQRKAFEALDLAKAELEQKRGVNFWRENYQALAEKYEMLKWQRVSLSLLVIVFA 478
           L +R  ++RK+   L + +  L+Q + +   RE  +AL  + E  +     +    +   
Sbjct: 382 LAIRYNDERKS--KLRIQQEALKQAQKIRSARE--EALKVEAETNERLEQMVQERTLELE 437

Query: 479 LILPIAHYRRRKECDQNQQDSLHGVLSRTSGLERLTHIEACQQTEHVHL-LALLDIDQLR 537
           + L   H   +K  +Q+  DSL GV +R++  +RL       + +   + L +LDID+ +
Sbjct: 438 ITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFK 497

Query: 538 QFNERHGYERGDIALQNTINTL-LHQLRAKEFVCRLGDDEFLVVMPNCRRTLSETRLFVL 596
             N++ G+  GD AL+    TL  H  R  + V R G +EF +++PN   T +E  + V 
Sbjct: 498 SINDQFGHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFAIILPN---TTAEGAIQV- 553

Query: 597 HHALNGKTPTDAKSTVGLS-------VTLSYLAVESGLAS----FTHFYPKLDSALSIAK 645
                 ++  DA +++GL+       +T+S + V + + S     T    + D AL  AK
Sbjct: 554 -----AESIRDAVTSIGLAWEGKPIPLTVS-IGVSADVISNDQHSTELLEQADKALYQAK 607

Query: 646 QSG 648
            SG
Sbjct: 608 NSG 610