Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 79.0 bits (193), Expect = 6e-19
 Identities = 108/511 (21%), Positives = 203/511 (39%), Gaps = 76/511 (14%)

Query: 203 FLGEYEEALQTYDLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKAL------- 255
           F GEY +AL       +L+      + +Y+    +   +  Y+ AL  + KAL       
Sbjct: 57  FTGEYAKALDDLHQAETLITSSELLASVYSYQATVYIGMRDYDKALSAVAKALALVVNID 116

Query: 256 EYRLEQGNPLLIAQVEHSLGDTYFKQGRYEESILYFEQ-------AKAHLTPANYLFG-- 306
           +  +++ + L IA + +S  D Y   G Y   +L   Q         A L  A YL G  
Sbjct: 117 DITIKRHSYLRIANI-YSEMDAYSDMGLYANKVLQLAQETDVRDICHAKLLRAIYLLGVK 175

Query: 307 ----------------------LAYVHL-GLGKAYIELNNFVEGDQHLFQALEYVNQHKD 343
                                 LA + + G G    E  +++     L  AL+     + 
Sbjct: 176 SPDTFDAFEDSRQYCDAKQFPLLATMSMKGKGMVLQERGDYLGARAILLLALKGYEAFQF 235

Query: 344 QHLQGLIYLSLAQAHFKEQKYAQAIDYANQAVAISESASLPRIKAQAYLQLAKIAEAEQQ 403
           Q     ++  LA+ +F   +  QA  +A + +   +  S    K  AY   A++  A++Q
Sbjct: 236 QLEISHVHALLAENYFATGELVQAKSHAVKVLTFPDDNSYIEHKHIAYKVFAELMAADKQ 295

Query: 404 YQEALSWYRQYAESELLLRNTEQRKAFEALDLAKAEL-EQKRGVNFWRENYQALAEKYEM 462
           +++A  + R+      L+ +  + K   A   AK    EQ R +N   +  +    +  +
Sbjct: 296 FEQAYEYSRKEQHYNQLIFDQSKMKTL-AYQAAKFNADEQAREINLLNKERELYIAQQTV 354

Query: 463 LKWQRVSLSLLVIVF-------ALILPIAHYRRRKECDQNQQDSLHGVLSRTSG--LERL 513
            + +  ++ + + +        A++L + + ++R+     + D+L GVL+R +G  L   
Sbjct: 355 KEREYTNMLMFITILVGGLFFLAILLVVGNLQKRRFMRMARMDALTGVLNRGAGQDLGEN 414

Query: 514 THIEACQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQNTINTLLHQLRAKEFVCRLG 573
             ++A  +    + + L D+D  ++ N+ +G+  GD AL+  +  L   +R  +   R+G
Sbjct: 415 LFVQAAARGGD-YCVILFDLDHFKRINDSYGHGTGDWALKKVVEVLKPHVRNGDVFARIG 473

Query: 574 DDEFLVVMP------------NCRRTLSETRLFVLHHALNGKTPTDAKSTVGLSVTLSYL 621
            +EF + +P             CRR L      +  H          K T+  S  +S +
Sbjct: 474 GEEFALFLPYANESKGMEVAEQCRRRLEAIDTHLSGH----------KFTITASFGVSGM 523

Query: 622 AVESGLASFTHFYPKLDSALSIAKQSGNGGL 652
             E    S      + D AL  AK +G   +
Sbjct: 524 TKED--LSLDPLLHRADMALYAAKSNGRNSV 552



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 347 QGLIYLSLAQAHFKEQKYAQAIDYANQAVAISESASLPRIKAQAYLQLAKIAEAEQQYQE 406
           QG + +  A  +F   +YA+A+D  +QA  +  S+ L    A  Y   A +    + Y +
Sbjct: 44  QGRLRIDRAIGYFFTGEYAKALDDLHQAETLITSSEL---LASVYSYQATVYIGMRDYDK 100

Query: 407 ALS 409
           ALS
Sbjct: 101 ALS 103