Pairwise Alignments

Query, 667 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 25/167 (14%)

Query: 495 NQQDSLHGVLSRTSGLERLTHIEACQQTEHVHLLALLDIDQLRQFNERHGYERGDIALQN 554
           +Q  SLH    R   +    HI   +Q      L L+DID+ + FN+ +G++ GD  L  
Sbjct: 182 DQLTSLHN--RRAYEIAIQDHIHRAEQQHTRCSLLLIDIDRFKVFNDNYGHQVGDKVLAY 239

Query: 555 TINTLLHQLRAKEFVCRLGDDEFLVVMPN------------CRRTLSETRLFVLHHALNG 602
               L   +R  +FV R G +EF+V++PN             R  +SE RL +      G
Sbjct: 240 VALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERRLAI------G 293

Query: 603 KTPTDAKSTVG-LSVTLSYLAVESGLASFTHFYPKLDSALSIAKQSG 648
           K   D K ++G ++V++   +++ G  + T  + + D AL  AK  G
Sbjct: 294 K---DKKLSLGAITVSIGLASLQEGDDADT-LFSRADKALYEAKSDG 336