Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter from Pseudomonas fluorescens FW300-N2E3

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 11/248 (4%)

Query: 18  MLSLSASAAES----TLDKVLSQGFITCGVSTGLPGFSNP-NAKGEWEGIDVEYCQAMAA 72
           +L     AAE+    TL K+ S   IT G       FS   +  G+  G  V+    +  
Sbjct: 14  LLGTQVQAAEAPLTGTLSKIASANSITLGYRDASVPFSYVGDQSGQPMGYSVDLANKIVE 73

Query: 73  AVLGD----KTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYD 128
            +       + KVK+  +T++ R   +Q+G +D+   +T  T++R   +  ++ G  Y  
Sbjct: 74  RIQQKLALPQLKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTVERQKQVAFSY-GFIYVK 132

Query: 129 GQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKG 188
           GQ  +   D G+KS  +L G SV   +GTT E  L  Y  +  +    +      +  + 
Sbjct: 133 GQ-LLTASDSGIKSFADLRGKSVVTTAGTTNERFLKSYNADHKIDMFVISAKDHGEAFQM 191

Query: 189 FDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVL 248
             +GR      D + LY  R     P   VV+ E  S+E    +VR+DD ++  +    L
Sbjct: 192 LQSGRAAAFYMDDALLYGERAKARDPHKWVVVGEEQSREIYSCMVRKDDPQFLALVNGAL 251

Query: 249 YAMVNAEE 256
             + ++ E
Sbjct: 252 ADLYSSGE 259