Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  443 bits (1139), Expect = e-129
 Identities = 211/333 (63%), Positives = 269/333 (80%), Gaps = 2/333 (0%)

Query: 12  VAASSAMLSLSASA-AESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAM 70
           V  ++++L +S  A A +TLD V  +GF+ CG+S GLPGFS  +AKG+++GIDV+ C+A+
Sbjct: 10  VLGAASLLGISGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGKYQGIDVDICRAV 69

Query: 71  AAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQ 130
           AAAV GD +KVK+ PLTAKERFTALQSGE+DVLSRNTTWT  RD+A+GLNF GV YYDGQ
Sbjct: 70  AAAVFGDASKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQ 129

Query: 131 GFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFD 190
           GF+V K+LGV SAKEL+GA+VC+Q+GTTTELNL+DYFR +G  Y P+ +DT+ +++K  +
Sbjct: 130 GFLVNKELGVSSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLE 189

Query: 191 AGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYA 250
           +GRCDVLT+DQS LYA R+ L KP   VVLPE+ISKEPLGP VRQ D++WF++ +W L+A
Sbjct: 190 SGRCDVLTSDQSQLYAQRIKLAKPADYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFA 249

Query: 251 MVNAEEYGITSKNVDEMMKS-DNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNYGES 309
           M+NAEE G+TS NV+EM KS  NP+V R+LG +G  G  L +  DW+ QIVKQVGNYGE 
Sbjct: 250 MLNAEELGVTSANVEEMAKSTKNPDVARLLGAEGEYGKDLKLPKDWAVQIVKQVGNYGEI 309

Query: 310 FDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           FDR VG+GS LKI+RG+NALWN GG  YAPP+R
Sbjct: 310 FDRNVGAGSELKIERGLNALWNNGGLQYAPPVR 342