Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  427 bits (1097), Expect = e-124
 Identities = 207/334 (61%), Positives = 258/334 (77%), Gaps = 1/334 (0%)

Query: 10  SVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQA 69
           +VV A +A   + A+ A +TLD +  +GFI CGVS GLPGFS P++ G+  GID + C+A
Sbjct: 9   AVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGIDADVCRA 68

Query: 70  MAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDG 129
           +AAAV GD TKVKF  L AKERFTALQSGEID+LSRNTTWT  RD+ +GL F GV YYDG
Sbjct: 69  VAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDG 128

Query: 130 QGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGF 189
            GF+V   LGVKSAKEL+GA++C+Q+GTTTELN++DYFR++G+ Y P+ FDT+ +++K  
Sbjct: 129 IGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSL 188

Query: 190 DAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLY 249
           + GRCDVLT+DQS LYA R  L KPD  +VLPE+ISKEPLGPVVR+ D++WF++ +W L+
Sbjct: 189 EGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVRWTLF 248

Query: 250 AMVNAEEYGITSKNVDEMMKS-DNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNYGE 308
           AM+NAEE  ITSKNV+   KS  NP+V R+LG DG  G  L +  DW  QIVKQVGNYGE
Sbjct: 249 AMLNAEEAKITSKNVEAEAKSTKNPDVARMLGADGTYGKDLKLEKDWVVQIVKQVGNYGE 308

Query: 309 SFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
            F+R +G G+PLKI RG NALWNAGG  YAPPIR
Sbjct: 309 VFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342