Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., extracellular solute-binding protein, family 3 from Synechococcus elongatus PCC 7942

 Score =  308 bits (789), Expect = 1e-88
 Identities = 149/340 (43%), Positives = 223/340 (65%), Gaps = 2/340 (0%)

Query: 5   LTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDV 64
           L +L  +  A+   L  + + + S L++V ++G + CGV   LPGFS  +++G + G+DV
Sbjct: 20  LVLLCFLPLAACRSLGGNETESNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDV 79

Query: 65  EYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALG--LNFV 122
           + C+A+AAA+  D   +++  L + ERF AL SGE+D+LSRNTTWTL RD+  G  L F 
Sbjct: 80  DICKAIAAALFNDPKAIEYRSLDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFA 139

Query: 123 GVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTA 182
              +YDGQG MV+++ G++S ++  G S+CV++GTT+ELNLAD  R  G+ Y+ + F  +
Sbjct: 140 PTTFYDGQGLMVRRNSGIQSLQDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNS 199

Query: 183 AQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFN 242
                 +  GRC+ +T+D+S L A R  L   D   +L  +ISKEPL P    +D  WF+
Sbjct: 200 DANYAAYAQGRCEGVTSDRSQLAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFD 259

Query: 243 VAKWVLYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQ 302
           V KWV+ A + AEE+GIT  N+D+   S NPE++R LGL+G  G  LG+ +D++Y+ +K 
Sbjct: 260 VVKWVVNATIQAEEFGITQANIDQFKTSKNPEIRRFLGLEGELGQQLGLSNDFAYRAIKA 319

Query: 303 VGNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           VGNYGE ++R VG  SPLK++RG+N L+  GG +Y+PP R
Sbjct: 320 VGNYGEIYERNVGQQSPLKLNRGLNQLYKNGGLLYSPPFR 359