Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  444 bits (1141), Expect = e-129
 Identities = 208/338 (61%), Positives = 268/338 (79%), Gaps = 3/338 (0%)

Query: 7   VLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEY 66
           +L ++V A+   +   A++A +TLD V ++GF+ CGV+TGL GF+ P+A G W G DV+Y
Sbjct: 5   ILTALVGAAVVGIGTHAASA-ATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFDVDY 63

Query: 67  CQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNY 126
           C+A+AAA+ GD +KVK+ PL+AKERF ALQSGE+DVL+RNTTW++ RD+ALG NF  VNY
Sbjct: 64  CKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRPVNY 123

Query: 127 YDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTS 186
           YDGQGFMV+K+L VKSA EL+GA+VCVQ+GTTTELNLADYF+ + + Y PVVF+   + +
Sbjct: 124 YDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLEEVN 183

Query: 187 KGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKW 246
             +DAGRCDV TTDQSGLY+LRL L KPD  +VLPEIISKEPL P VRQ DD+WF++  W
Sbjct: 184 AAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDIVSW 243

Query: 247 VLYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGL--DGPKGTGLGIRDDWSYQIVKQVG 304
           V YA+V AEE+G+T  N++EM KS NP+V+R LG+  D   GT LG+ ++W+  IVK VG
Sbjct: 244 VHYALVQAEEFGVTQANLEEMKKSTNPDVQRFLGVEADSKIGTDLGLTNEWAVNIVKAVG 303

Query: 305 NYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           NYGE FDR +G+GSPLKI+RG+NALWN GG  YAPP+R
Sbjct: 304 NYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341