Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  300 bits (767), Expect = 5e-86
 Identities = 149/335 (44%), Positives = 206/335 (61%), Gaps = 1/335 (0%)

Query: 8   LASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYC 67
           LA+ +A      S SA A E TLD + ++G I  GV    PGFS P++ G W+G  ++  
Sbjct: 17  LAAALALCGLGFSSSAEAGE-TLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIG 75

Query: 68  QAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127
           +A+A  V  D  K +FV  + ++R  ALQSGE D+L    T T+ R + LG +F  V +Y
Sbjct: 76  RALAVTVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFY 135

Query: 128 DGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSK 187
           DGQG +V K LG+    EL+GA+VCVQ+GTT ELN+AD+FR   +++KPVV + + +  K
Sbjct: 136 DGQGLLVPKKLGITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLK 195

Query: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247
            F +GRCDVLT D S L   R  L      V+LPE ISKEPL P +R  DD+W  +  W 
Sbjct: 196 AFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWT 255

Query: 248 LYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNYG 307
           +YA++ AEE GIT   +D  + SDNP ++R LG+D       G+   ++Y I+K +GNYG
Sbjct: 256 VYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLDAKFAYNIIKALGNYG 315

Query: 308 ESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           E F+R+VG  S L  +RG N  W  GG +Y+PP R
Sbjct: 316 EVFERSVGKASKLGFERGYNQPWTQGGLLYSPPFR 350