Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  271 bits (694), Expect = 1e-77
 Identities = 146/348 (41%), Positives = 209/348 (60%), Gaps = 15/348 (4%)

Query: 8   LASVVAASSAMLSLSASAAES------------TLDKVLSQGFITCGVSTGLPGFSNPNA 55
           LA V+A   A+LS  A  AE             TL +V  +G++TCGV+  L G  + + 
Sbjct: 15  LAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDP 74

Query: 56  KGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDS 115
            G W G D++YC+A+AAA LGD  +V+FVPL  + R  AL SGE+D+LSRNTTWTL+RD+
Sbjct: 75  DGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDA 134

Query: 116 ALGLNFVGVNYYDGQGFMVKKDL-GVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTY 174
             G++FVGV+ +DG G +  KDL G   A     A +CVQS  T    L      +G+++
Sbjct: 135 GQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAARVLPARMAAAGLSF 194

Query: 175 KPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL-RLNLEKPDSAVVLPEIISKEPLGPVV 233
             + F +  +         CD    D++ L +L      +PD+  +LP++++ EPLGP V
Sbjct: 195 TILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRLLPDLLAVEPLGPAV 254

Query: 234 RQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMKS-DNPEVKRILGLDGPKGTGLGIR 292
           R  D  WF++A+W L+A++ AEE G++   +  +++S  +PE++R LGLD   G  LG+ 
Sbjct: 255 RDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDPGVGAPLGLD 314

Query: 293 DDWSYQIVKQVGNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPP 340
           D W  +IV QVG YGE FDR +G GSPLK++RG NAL   GG M APP
Sbjct: 315 DAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPP 362