Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., amino acid ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  302 bits (773), Expect = 9e-87
 Identities = 154/335 (45%), Positives = 214/335 (63%), Gaps = 6/335 (1%)

Query: 10  SVVAASSAMLSLSASAAES--TLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYC 67
           S+ AA + +L+L +SAA +  TLD++ S+G I  GV T  PG+  P++ G W+G  V++ 
Sbjct: 10  SIGAALAVVLALVSSAASAGPTLDRIKSRGVIKVGVGT-TPGYFAPDSNGRWQGFFVDFG 68

Query: 68  QAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127
           +A+A  V GD  KV+F   + ++R  ALQSGE DVL    T T+ R   LG +F    +Y
Sbjct: 69  RALAVTVFGDPDKVQFTSSSPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFY 128

Query: 128 DGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSK 187
           DGQG +V+KDLGV SA +L+GA++ +QSGTT ELN+ADYFR     + PV  +  ++   
Sbjct: 129 DGQGILVRKDLGVTSASQLDGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIA 188

Query: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247
             D+GR D LT D S L A +  L+KP   V+LPE +SKEPL P V   DD+W  +  W 
Sbjct: 189 ALDSGRVDGLTQDASDLAAKQTQLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWT 248

Query: 248 LYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNYG 307
           + A + AEE+GITSKNVD+ +KSD+P ++R LG+D      +G+   W+Y I+K VGNYG
Sbjct: 249 VNATIQAEEWGITSKNVDDFLKSDDPSIRRFLGVDPSLAESIGLDPKWAYTIIKTVGNYG 308

Query: 308 ESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           E FDR +    PL  +RG N LW  GG +Y+PP R
Sbjct: 309 EIFDRHL---KPLGWERGYNRLWTQGGLLYSPPFR 340