Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., glutamate/glutamine/aspartate/asparagine-binding protein BztA from Phaeobacter inhibens DSM 17395

 Score =  382 bits (980), Expect = e-111
 Identities = 189/343 (55%), Positives = 244/343 (71%), Gaps = 6/343 (1%)

Query: 1   MANKLTVLASVVAASSAMLSLSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWE 60
           M NK+ + A  +A  +A      +AA  TLD V ++G + CGV+TGL GF+ PNA GEWE
Sbjct: 1   MKNKVILGALTIAGLAA-----GAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWE 55

Query: 61  GIDVEYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLN 120
           G DV  C+A+AAAVLGD T V+FVP T K RFTAL SGEID+L+RNTTWT  RD  L   
Sbjct: 56  GFDVAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFE 115

Query: 121 FVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFD 180
           FVGVNYYDGQGFMV K+LGV SAKEL+GA+VC+Q+GTTTELNLAD+FR++ ++Y+PV  +
Sbjct: 116 FVGVNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIE 175

Query: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKW 240
           T A+  + + AG CDV TTD SGL A R   + P + V+LPEIISKEPLGP+VR  D +W
Sbjct: 176 TNAEAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEW 235

Query: 241 FNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPKGTGLGIRDDWSYQI 299
            +V +W L A+V AEE G+TS N+ EM   ++NPE+ R+LG +G  G  LG+  DW+   
Sbjct: 236 GDVVRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTEGTLGEMLGLSADWAKNA 295

Query: 300 VKQVGNYGESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342
           +   GNYGE F + +G  +P+ + RG+NA W  GG +YAPP R
Sbjct: 296 IGAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338