Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., amino acid ABC transporter, amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 15/236 (6%)

Query: 8   LASVVAASSAMLSLSASAAES--TLDKVLSQGFITCGVST-GLPGFSNPNAKGEWEGIDV 64
           L  ++A ++A L  + SAA +    D V+    I  G+ T  +PG    N KGEW G D 
Sbjct: 3   LGKIIALAAAFLVFTGSAALAGPAYDNVMKDKKIRVGLMTDSIPG-GFYNEKGEWGGFDY 61

Query: 65  EYCQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGV 124
           +    +A  +  D   ++ V +  K R   +Q G +D+   N T T +RD ++  +F   
Sbjct: 62  DIATEIAKRMGVD---IERVQVNNKTRIAYVQQGRVDISVSNMTHTRERDKSV--DFSIT 116

Query: 125 NYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSG---MTYKPVVFDT 181
            ++DGQ  + KK    KS K++ G  +    GTT+E+N+    + +G        + F  
Sbjct: 117 YFFDGQKVLAKKGQ-FKSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQK 175

Query: 182 AAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDD 237
            ++  +    GR    +TD S L  +  + ++P    ++   +++EP G  + QDD
Sbjct: 176 ESECFQALQMGRVAGWSTDASIL--VGYSAKEPGKFELVGNFLAEEPYGIAMPQDD 229